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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015836367.1_cds_XP_016506309.1_19545
CDS Infomation

[gene=LOC107824098] [db_xref=GeneID:107824098] [protein=transcription factor bHLH78-like isoform X2] [protein_id=XP_016506309.1] [location=complement(join(38377..38414,38699..38798,38896..38967,39353..39421,39544..39609,40139..41188))] [gbkey=CDS]
Sequence

ATGGATAAAGACTACTTCTCTAATGGTGGAATTCCACCGCTCCTCCAATTTGAACCCAGA
ATTCCATTAAATTCCATTTCAGGGCAATCTTCAGACTGTTTTCTAAACACCCATTTGGAC
AATAAATCTATAGATCAATACACCAATTTCGATTCAGCTTTGAGTTCCATGGTCTCATCT
CCTGTTGCCTCCAATTCTGTAAATTCCAACGATAATTTCGCACTCCGCGAATTAATTGGA
AAATTAGGCACAATTTGTAGCTCTCCTCCACCTCAATTCACCGATTATGCTGTGAATTAT
GATCATATTAATAATATTAATAACAGTGATTCCACTATGACTTCATGTTATAGTACACCT
TTAAACTCTCCTCCAAAATTACGAAATAATATACCAAATTTTGATATTTCAGTTCCAGTA
AATCCTCCTCAATTTCCTACAGTGTCAGCTAATCCAGAGTTTTCACATAAAGCTGCTAAA
TTTTCTTGTTTTGGTAGCAGTAGTTTTAATGGCAGAACGAGTCAATTTGGGCTAAACAAT
ACAGAATTGAGTCATAGATCTAGGAATGAGCCTATGGGAAGTGGAAAATTATCTAGAATA
TCGAGTAGCCCTTCTCTTGTACTACAGAACAAAAATTCAGGCCAAACCCAGGTGGAAATG
ATGTGTGAAAATTTGGATTTGGGCAAATTTTCAGGTCCTAATAATGCCAATTCCAATGAA
GAATGTTCTGTTTCTGAACAAATCCCAAGTGGTGAAATTGGGTCAAAAACACCAAAGGAA
TTGAATTCTAGGAAAAGAAAAGCAGTTTCAAAAGGAAAAGGAAAGAAGTATAATGAGGCT
GAAGCTGAAGATGGTACAAAGGAAAAGAGATCTAAATCAACAGAAGGTAATGGGAAGAAA
AATGGAACAGTTAAAATGGAGGAAACAAATGGTAGTGAAGGTGATGAAGCTGAGAAAGAA
GCAAAGGAAGAGCAAAAGCCAGCAAAGGATTGGATTCATGTTAGAGCAAGAAGAGGTCAA
GCCACTGATAGTCATAGTCTAGCTGAAAGAGTCCGTCGAGAGAAGATCAGTCAAAGAATG
AAGTTTTTGCAAGATCTTGTACCAGGCTGTAATAAGGTGACTGGAAAAGCACTAATGCTT
GATGAAATTATAAATTATGTACAGTCTCTCCAACGCCAAGTTGAGATATGCCAATCAAAT
GGCTCTTTACAACAACATATGTTCCCATTAGATAGATCTTGTGAAAATCTTAATCAGCTT
CACACAATCTGTGAGGATGAACTGCAAACAATTGTTCAGATGGGATTTAGCCAAAATTCT
TACCAGGACCTAACATTGCAGTCACAAGCTTTTCCTGTGCCTAATTCGACGTCTAACATG
AAACTTGATATGTAA

Peptide Sequence

PEP ID

XP_016506309.1
PEP Infomation

PREDICTED: transcription factor bHLH78-like isoform X2 [Nicotiana tabacum]
Sequence

MDKDYFSNGGIPPLLQFEPRIPLNSISGQSSDCFLNTHLDNKSIDQYTNFDSALSSMVSS
PVASNSVNSNDNFALRELIGKLGTICSSPPPQFTDYAVNYDHINNINNSDSTMTSCYSTP
LNSPPKLRNNIPNFDISVPVNPPQFPTVSANPEFSHKAAKFSCFGSSSFNGRTSQFGLNN
TELSHRSRNEPMGSGKLSRISSSPSLVLQNKNSGQTQVEMMCENLDLGKFSGPNNANSNE
ECSVSEQIPSGEIGSKTPKELNSRKRKAVSKGKGKKYNEAEAEDGTKEKRSKSTEGNGKK
NGTVKMEETNGSEGDEAEKEAKEEQKPAKDWIHVRARRGQATDSHSLAERVRREKISQRM
KFLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEICQSNGSLQQHMFPLDRSCENLNQL
HTICEDELQTIVQMGFSQNSYQDLTLQSQAFPVPNSTSNMKLDM

Transcript Sequence

Gene sequence data has not been registered.